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- Filter Python stdlib modules at scan time to prevent false positives when the runtime checker fails (e.g. pip:argparse, pip:sys) - Install pip/npm packages one-by-one instead of batch so partial success is preserved when one package fails - Persist missing deps to DB after install via StoreMissingDeps() so reload reflects actual state instead of stale data - Use explicit master tenant context in handleInstallDeps for consistency with rescanAndUpdate()