chore(deps): declare click as a direct dependency (#2095)

CHANGELOG.md

@@ -168,6 +168,8 @@ CLI:
   - Fix `project index-file` command not using only the relevant language server to index the given file (#1965)
 
 * Dependencies:
+  - Fix: declare `click` as a direct dependency; all three console scripts (`serena`, `serena-agent`,
+    `serena-hooks`) import it but it was only available transitively
   - Remove the redundant `dotenv` dependency; the `dotenv` module is provided by `python-dotenv`
   - Upgrade the `mcp` SDK from 1.28.1 to 2.2.0
 

pyproject.toml

@@ -22,6 +22,7 @@ dependencies = [
   "overrides==7.7.0",
   "python-dotenv==1.2.2",
   "mcp==2.2.0",
+  "click==8.3.1",
   "flask==3.1.3", # bumped from 3.1.1 for CVE fix (also fixes werkzeug alert)
   "sensai-utils==1.5.0",
   "pydantic==2.12.5",

uv.lock

@@ -2823,6 +2823,7 @@ source = { editable = "." }
 dependencies = [
     { name = "anthropic" },
     { name = "beautifulsoup4" },
+    { name = "click" },
     { name = "cryptography" },
     { name = "docstring-parser" },
     { name = "filelock" },
@@ -2892,6 +2893,7 @@ requires-dist = [
     { name = "agno", marker = "extra == 'agno'", specifier = "==2.6.6" },
     { name = "anthropic", specifier = "==0.117.0" },
     { name = "beautifulsoup4", specifier = "==4.14.2" },
+    { name = "click", specifier = "==8.3.1" },
     { name = "cryptography", specifier = "==50.0.0" },
     { name = "docstring-parser", specifier = "==0.17.0" },
     { name = "filelock", specifier = "==3.25.2" },