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Improve docs on 'Running Serena'
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## Running Serena
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Serena is a command-line tool with a variety of sub-commands.
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The main command is `start-mcp-server`, which starts the MCP server that
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provides Serena's functionality to LLM clients via the Model Context Protocol (MCP).
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This section describes
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* varies ways of running Serena
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* how to run and configure the most important command, i.e. starting the MCP server
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* other useful commands.
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### Ways of Running Serena
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There are several ways to run Serena, depending on your preferences and setup.
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In the following, we will refer to the command used to run Serena as `<serena>`,
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which you should replace with the appropriate command based on your chosen method.
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